Methylomes as key features for predicting recombination in some plant species

Mauricio Peñuela; Jorge Finke; Camilo Rocha

doi:10.1007/s11103-023-01396-8

Methylomes as key features for predicting recombination in some plant species

Mauricio Peñuela, Jorge Finke, Camilo Rocha

Universidad Javeriana

Research output: Contribution to journal › Article › peer-review

Abstract

Plant species methylation data can be used to predict recombination rates using machine learning regression models; high model performance values on sorghum and tomato data are presented in this paper.

Original language	English
Article number	25
Journal	Plant Molecular Biology
Volume	114
Issue number	2
DOIs	https://doi.org/10.1007/s11103-023-01396-8
State	Published - Apr 2024

Keywords

CHH methylation
Extra Trees
Machine learning
Model plants
Plant breeding

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10.1007/s11103-023-01396-8

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title = "Methylomes as key features for predicting recombination in some plant species",

abstract = "Plant species methylation data can be used to predict recombination rates using machine learning regression models; high model performance values on sorghum and tomato data are presented in this paper.",

keywords = "CHH methylation, Extra Trees, Machine learning, Model plants, Plant breeding",

author = "Mauricio Pe{\~n}uela and Jorge Finke and Camilo Rocha",

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AU - Peñuela, Mauricio

AU - Finke, Jorge

AU - Rocha, Camilo

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N2 - Plant species methylation data can be used to predict recombination rates using machine learning regression models; high model performance values on sorghum and tomato data are presented in this paper.

AB - Plant species methylation data can be used to predict recombination rates using machine learning regression models; high model performance values on sorghum and tomato data are presented in this paper.

KW - CHH methylation

KW - Extra Trees

KW - Machine learning

KW - Model plants

KW - Plant breeding

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JO - Plant Molecular Biology

JF - Plant Molecular Biology

IS - 2

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ER -

Methylomes as key features for predicting recombination in some plant species

Abstract

Keywords

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