Analysis of binding residues between PDGF-BB and epidermal growth factor receptor: A computational docking study

Ricardo Cabezas, Daniel Torrente, Marco Fidel Avila, Jannet González, George Emilio Barreto

Producción: Capítulo del libro/informe/acta de congresoContribución a la conferenciarevisión exhaustiva

Resumen

A directed docking was performed using Cluspro between human PDGF-BB and EGFR using specific templates obtained from PDB. Various conserved residues were found to be involved in the docking interaction of the complex by means of hydrophobic interactions and hydrogen bonds. An electrostatic potential evaluation of the PDGF-BB-EGFR complex was also performed to validate if the complex is electrostatically complementary in the binding area. Results suggested a possible binding mechanism which could explain the in vivo evidence of formation of heterodimeric receptors EGFR-PDGFR.

Idioma originalInglés
Título de la publicación alojadaAdvances in Computational Biology - Proceedings of the 2nd Colombian Congress on Computational Biology and Bioinformatics CCBCOL 2013
EditorialSpringer Verlag
Páginas29-39
Número de páginas11
ISBN (versión impresa)9783319015675
DOI
EstadoPublicada - 2014
Evento2nd Colombian Congress on Computational Biology and Bioinformatics, CCBCOL 2013 - Manizales, Colombia
Duración: 25 sep. 201327 sep. 2013

Serie de la publicación

NombreAdvances in Intelligent Systems and Computing
Volumen232
ISSN (versión impresa)2194-5357

Conferencia

Conferencia2nd Colombian Congress on Computational Biology and Bioinformatics, CCBCOL 2013
País/TerritorioColombia
CiudadManizales
Período25/09/1327/09/13

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