Methylomes as key features for predicting recombination in some plant species

Mauricio Peñuela; Jorge Finke; Camilo Rocha

doi:10.1007/s11103-023-01396-8

Methylomes as key features for predicting recombination in some plant species

Mauricio Peñuela
, Jorge Finke
, Camilo Rocha

Department of Electronics and Computer Science

Universidad Javeriana

Research output: Contribution to journal › Article › peer-review

5 Scopus citations

Abstract

Plant species methylation data can be used to predict recombination rates using machine learning regression models; high model performance values on sorghum and tomato data are presented in this paper.

Original language	English
Article number	25
Journal	Plant Molecular Biology
Volume	114
Issue number	2
DOIs	https://doi.org/10.1007/s11103-023-01396-8
State	Published - Apr 2024

Keywords

CHH methylation
Extra Trees
Machine learning
Model plants
Plant breeding

Access to Document

10.1007/s11103-023-01396-8

Cite this

@article{0b6c2bd204834a2baba0dc45cfce82df,

title = "Methylomes as key features for predicting recombination in some plant species",

abstract = "Plant species methylation data can be used to predict recombination rates using machine learning regression models; high model performance values on sorghum and tomato data are presented in this paper.",

keywords = "CHH methylation, Extra Trees, Machine learning, Model plants, Plant breeding",

author = "Mauricio Pe{\~n}uela and Jorge Finke and Camilo Rocha",

note = "Publisher Copyright: {\textcopyright} The Author(s) 2024.",

year = "2024",

month = apr,

doi = "10.1007/s11103-023-01396-8",

language = "English",

volume = "114",

journal = "Plant Molecular Biology",

issn = "0167-4412",

publisher = "Springer Science and Business Media B.V.",

number = "2",

}

TY - JOUR

T1 - Methylomes as key features for predicting recombination in some plant species

AU - Peñuela, Mauricio

AU - Finke, Jorge

AU - Rocha, Camilo

N1 - Publisher Copyright: © The Author(s) 2024.

PY - 2024/4

Y1 - 2024/4

N2 - Plant species methylation data can be used to predict recombination rates using machine learning regression models; high model performance values on sorghum and tomato data are presented in this paper.

AB - Plant species methylation data can be used to predict recombination rates using machine learning regression models; high model performance values on sorghum and tomato data are presented in this paper.

KW - CHH methylation

KW - Extra Trees

KW - Machine learning

KW - Model plants

KW - Plant breeding

UR - https://www.scopus.com/pages/publications/85187172636

U2 - 10.1007/s11103-023-01396-8

DO - 10.1007/s11103-023-01396-8

M3 - Article

C2 - 38457042

AN - SCOPUS:85187172636

SN - 0167-4412

VL - 114

JO - Plant Molecular Biology

JF - Plant Molecular Biology

IS - 2

M1 - 25

ER -

Methylomes as key features for predicting recombination in some plant species

Abstract

Keywords

Access to Document

Other files and links

Fingerprint

Cite this